Lecture 1 - Cell Cycle
Resources: Chapters 1-2 the textbook glossary, index, the syllabus, canvas, and lab!
Vocabulary
- Chromosome, locus, gene, allele, mutants of genes
- Alleles are variants of a gene.
- Genome, karyotype, idiogram, banding, centromere position (names)
- Prokaryote, eukaryote
- Sister chromatids — note these are "identical copies" and chromatid is not "chromosome"
- Telomere, centromere, kinetochore, tubulin
- Diploid, haploid, 2n, 1n, gamete cell, somatic cell
- Heterozygote, homozygote, dominant, recessive
- P-MAT or PpMAT, meiosis-I, meiosis-II
- Prophase, Prometaphase, Metaphase, Anaphase, Telophase, Cytokinesis
General
- What are the three traditional disciplines in the study of Genetics?
Name 3 model organisms used in Genetics, and what type of biology are they used to model (see textbook appendix)!- Drosophilia (fruit flies) can model alzheimers and diabetes.
- C. elegans can model parkinsons and diabetes.
- Ants can model evolutionary genetics through the homologous HOX genes.
- Name 3 differences in the DNA of prokaryotes v. eukaryote cells.
- Prokaryotic DNA is a double stranded circle.
- Prokaryotic DNA exists in the cytoplasm. Eukaryotic DNA exists in a protected nucleus.
- Why is DNA packing so important in eukaryotes?
- What cells go through the Cell Cycle (Eukaryotes or Prokaryotes?)
- What does homologous mean when we talk about genes - how do we determine if genes are homologous - what do we need to compare?
- What is the normal time it takes for a cell to complete one cell cycle? Is there a universal 'normal' time?
- What is the name of the stage of the cell cycle that deals specifically with nuclear division in growing cell populations?
Cell Cycle
- List the 3 stages of interphase and the major events that take place in each stage.
- What is the "resting" (quiescent) stage? Name examples of cells, or biological structures, that have exited the cell cycle, but are not dead?
- Know the stages of the Cell cycle (G1, S, G2, M and G0)
- What are the major cell cycle check points? What do they "check", when do they happen?
- What is cytokinesis, explain the differences in cytokinesis, animals v. plants.
- What happens at the Restriction Point in the cell cycle? What proteins are involved in the transition between G1/S?
- Know what the chromosomes look like in G1, G2, and the phases of PMAT of Mitosis: are they replicated or not? Are they unpacked like a mess of spaghetti, and when are they compacted into little "X" shapes? Is that shape a G1 or G2/M chromosome?
- Know the essential structural elements of eukaryotic chromosome: (what is a CEN, kinetochore, what is a CEN)?
- Know the three ways you can identify chromosomes in a karyotype.
- What are microtubules made of? Why do they interact with the CENs, what function do they serve?
- In what sub-phase of Mitosis (M-phase) are the microtubules growing? In what sub-phase are they shrinking.
- Explain how Rb, CDK kinase, cyclin function to determine whether a cell divides. What does Rb stand for, and what happens in the disease?
- What is cancer? Does it usually arise from a single mutation? What a Tumor Suppressor?
- What are "beads on a string" - what are the "beads" what is the string?
- What are nucleosomes made of?
- By what factor does DNA get packed, in order to fit into a nucleus?
Lecture 2 - Mitosis
Resources: Chapters 1-2 the textbook glossary, index, syllabus, canvas, and lab!
Mitosis
- When does mitosis begin in an organism; when does it end?
- How do we know that chromosomes does not correlate with complexity? Go here: and tell me how many chromosomes are in the genome of your favorite animal, along with its common name and its genus + species. Note: those are diploid chromosome counts. What is your favorite organism with a lot of chromosome, and is your favorite organism with very few chromosomes - this will be a discussion on canvas - for points/credit. :)
- https://en.wikipedia.org/wiki/List_of_organisms_by_chromosome_count
- A chromosome in G2 of cell cycle looks like two chromosomes, but it is not. It is a single chromosome in the replicated state! How can you tell the difference? What structures do you count, to count chromosomes?
- What is the difference between a Locus and an Allele? For a gene, there may be many alleles in the population - what's defines the 'wildtype', and what defines 'mutant'?
- What is the difference between a karyotype and an idiogram (this reviews from lecture 1 slide 27)? How do we identify the chromosomes under the microscopes?
- Why do metaphase chromosomes (which are the ones we look at in a karyotype) look like an "X"?
- What does 'heterozygote' mean?
- List 5 subphases of M-phase mitosis: what comes before M-phase, what comes after it?
- Know what happens to the DNA in all 5 stages of Mitosis.
- Where is the kinetochore and why is it so important? What is its purpose?
- What is a microtubule, how is it related to the mitotic spindle, how does it lengthen/shorten, when in Mitosis does it lengthen/shorten. What happens when there are errors in these functions?
- What is the MTOC, what is the other name for it?
- What is cytokinesis, and how is it different in animals v. plants?
- 46, XX means what? 46, XY means what?
- Define aneuploidy.
- What is it called when a chromosome does not split properly in mitosis anaphase?
- If the mitotic spindle is not formed correctly, what can result? Name one human disorder is caused by this - name the disorder, what chromosome is affected, and how is that karyotype/genotype written?
- What does diploid mean? How many copies of each gene does a diploid carry?
- What is a metaphase plate?
- You are examining human chromosomes 2, 7, 22, X and Y ... which is largest, which is smallest? Which are autosomes, which are sex chromosomes?
- Diploid cells in a bug have 10 chromosomes in each nucleus. Tell me what is the 2n number, what is the 1n number, and how many chromosomes vs. sister-chromatids are found in that cell at each stage: G1, S, G2, Prophase, Prometaphase, Metaphase, Anaphase, Telophase.
- Know where the chromosome sits on these 4 types of chromosomes: Metacentric, Submetacentric, Acrocentric, Telocentric.
- For a heterozygote gene B (Bb genotype) draw the homologous pair of chromosomes in G1 before S, then in G2 after S, at the mitotic metaphase plate. Do they pair up in mitosis ...?